It is not an MKV video file, it is an MP4.
The only tsmuxer I have is in the program's Tools directory. It is command line, too old and did not work. I used FFmpeg, but could not find any settings to not change SEI.
Anyway, I found the setting in MultiAVCHD under Insert enhancement information. Checking this off made no difference and the frame rate is still variable.
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