I make a test with a recently ISO converted to SBS with BD3D2MK3D.
I used MakeMkv to rip that ISO to a mkv output (adding MVC-3D video).
Of course BD3D2MK3D can't open the mkv produced by MakeMkv, but I use tsMuxeR to open the mkv (see attached image, maybe BD3D2MK3D can accept mkv3D and use tsMuxeR to extract tracks).
I generate a new test ISO with tsMuxeR, from the mkv, and now is accepted by BD3D2MK3D and seems work fine.
See the 2 attached log's. Forget audio and x264 parameters differences. Maybe there are a problem with subs like the info in avs show:
Original avs
Code:
# Subtitle: Spa PGS, 3D-plane: 0
# Subtitle: Eng PGS, 3D-plane: 1
# Subtitle: Spa PGS, 3D-plane: 2
Test avs
Code:
# Subtitle: Spa PGS, 3D-plane: 0
# Subtitle: Eng PGS, 3D-plane: 0
# Subtitle: Spa PGS, 3D-plane: 0