Maybe it's hardware dependent. I use I7 Core-i with Sandy and Ivy Bridge, no Haswell.
I have tested all updates of Intel DLLs until April 2014 - but no luck, the glitches in the movies remained there. With software decoding too.
Intel drivers of the Media SDK are not stable when transcoding to MVC 3D (FRIM). I had crashes and crashes again, often had to reboot to free memory. Then I gave up.
AFAIK professional software such as rovi TotalCode doesn't use the Media SDK and works well.
We are left with only the use of x264 -> BD3D2MK3D.
So I will test again, especially with libmfxsw32.dll v5.14.4.28.