Problem TS (MPEG2) to MKV (AAC) with MeGUI

[prijatelj.v]

Original (sample) TS mediainfo:

http://pastebin.com/MDsmr04a

and after "TsRemux" (to remove unnecessary audio) this source (mediainfo) looks like this:

http://pastebin.com/2fyebz18

I want to convert TS to MKV (x264 video and AAC audio).I use File Indexer (FFMS2) :

http://postimg.org/image/n7u8xhfi5/
http://postimg.org/image/n7u8xhfi5/

...and "AutoEncode"...After creating FFINDEX file and
(audio + video) AVS script MeGUI start (and "like") complete audio converting and then throw an error : "(An error occurred: FFAudioSource: Seeking is severely broken)"
Here it is MeGUI error log :

http://pastebin.com/ZtMjBimt

Is the only way to extract audio to manually "put" in MeGUI (Audio Input) etc,or...

[tebasuna51]

Like you see FFMS2 can have problems with TS files.

Using MeGUI with your original sample I recommend this:

1) Open the E:\sample\sample.ts with MeGUI -> Tools -> HD Streams Extractor (eac3to GUI)

2) Extract the video track as MKV (if you want resize/recode the MKV with FFMS2)

3) Extract/decode the track 3 (the desired MP2, audio track 2) like WAV

4) Open the WAV with MeGUI Input Audio and recode the WAV to your desired format (if you want low quality aac -he 64 Kb/s use Qaac instead NeroAacEnc)

5) Mux with MeGUI -> Tools -> Muxer -> MKV Muxer the video and audio.

[prijatelj.v]

that's it...
thank you very much "tebasuna51" to help
perfectly done,best regards...