If you are using MPC with LAV filters, I think you can add the LAV filters as "Prefer" and the Haali Splitter as "Block" to MPC in the external filters section, so it won't use Haali as the splitter when playing videos through MPC, but will leave it unaffected for eac3to. Ideally you would use MPC as the front end only with all its splitters and decoders disabled, so it uses LAV instead.
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