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To link against external libs, you can use PKG_CONFIG_PATH or specify location of those libs via --extra-cflags and --extra-ldflags. For example:
PKG_CONFIG_PATH="/usr/local/lib/pkgconfig" ./configure
OR
./configure --extra-cflags="/usr/local/include" --extra-ldflags="/usr/local/lib"
Another way:
LDFLAGS="-L/usr/local/lib" CFLAGS="-I/usr/local/include" ./configure
And you'll need to pass --enable-nonfree to configure if you want to link ffmbc against libfaac.
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